BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015B01SP1|AL426783
(977 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1712 1242 0.0
3x_Contig1569 153 4e-37
3x_Contig1799 145 1e-34
3x_Contig1772 143 4e-34
>3x_Contig1712
Length = 23668
Score = 1242 bits (623), Expect = 0.0
Identities = 806/867 (92%), Gaps = 4/867 (0%)
Strand = Plus / Minus
Query: 114 taaagtgtcgttatataaggagataccacggataataaatgatttaaaggcgcataatgt 173
|||||||| |||||||||||||||| | ||||||||||||||||||||| | ||| |||
Sbjct: 10372 taaagtgtagttatataaggagataaaaaggataataaatgatttaaaggagaatattgt 10313
Query: 174 aaaactgctcagtgcatctcgtacgtgggctcctgaaattgccattgagatgttgaagct 233
|||| || | |||| || | ||| ||||| | || | ||| |||||||||||| || |
Sbjct: 10312 aaaaatgataagtgaatatagtaagtgggataatggatttgaaattgagatgttggagat 10253
Query: 234 cttcaaaattaagatgaacggtgaaatagtcagtctttactccgtttttgacgactttaa 293
|| |||||||||||||| ||||||||||| || ||| | |||||||||||||||||
Sbjct: 10252 attaaaaattaagatgaaaggtgaaatagtatgtattttataagtttttgacgactttaa 10193
Query: 294 ctggggggaccatccaaagattaaccatattaggagtggtattaagaccgtgtatggcaa 353
||||||||| || ||||||||| ||||||||||||||||||||| |||||||| ||
Sbjct: 10192 ctggggggaaaataaaaagattaaaaatattaggagtggtattaagaaagtgtatggaaa 10133
Query: 354 ggacagtctaaatcaactgaaagtatgtttatttgacgacgagagt-gcaatagggatgt 412
||| ||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 10132 ggaaagtataaataaaatgaaagtatgtttatttgacgacgagagtcgcaatagggatgt 10073
Query: 413 cgaaaaatatggtataaaayatctacatgttaaggatcctgttgaaggaccttcttggaa 472
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 10072 cgaaaaatatggtataaaatatctacatgttaaggatcctgttgaaggaccttcttggaa 10013
Query: 473 gatgtataamaatyatctagaaagtctagatagctgataatatattymaggtaaggacgt 532
||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 10012 gatgtataaaaattatctagaaagtctagatagctgataatatatttaaggtaaggacgt 9953
Query: 533 tacatgttattaccggcttattaaaggccaagcattttgaaatccaagttgccgaatata 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9952 tacatgttattaccggcttattaaaggccaagcattttgaaatccaagttgccgaatata 9893
Query: 593 atagtcgacaagcaaaaaagaatgccacctccaggaatcgaacctgggtttcatcggcca 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9892 atagtcgacaagcaaaaaagaatgccacctccaggaatcgaacctgggtttcatcggcca 9833
Query: 653 caacgatgtgtaataacccctatactaagatggccgaattcattgaaagttgaagttagg 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9832 caacgatgtgtaataacccctatactaagatggccgaattcattgaaagttgaagttagg 9773
Query: 713 tcgccattatactgtataactgtcatcagctatcttagttactatgctctttgcgtastt 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9772 tcgccattatactgtataactgtcatcagctatcttagttactatgctctttgcgtagct 9713
Query: 773 gctcttttatcatcataaccagaataagatcgtcgaatatggacttctcctcacctatag 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9712 tgtcttttatcatcataaccagaataagatcgtcgaatatggacttctcctcacctatag 9653
Query: 833 cagtygcactcactgaagtgaaagttactctttcaaacggcgcagtcacgtgaaggagtg 892
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9652 cagttgcactca-tgaagtgaaagttactctttcaaacggcgcagtcacgtgaaggagtg 9594
Query: 893 tcctcaaagaagggacgcaaaattgcggtaccttcgtatttaccggccgagatgatcc-t 951
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9593 tcctcaaagaagggacgcaaaattgcggtaccttcgtatttaccggccgagatgatcctt 9534
Query: 952 tttcatacgatt-chaatattccaaaa 977
|||||||||||| | ||||||||||||
Sbjct: 9533 tttcatacgattgcaaatattccaaaa 9507
>3x_Contig1569
Length = 11625
Score = 153 bits (77), Expect = 4e-37
Identities = 80/81 (98%)
Strand = Plus / Minus
Query: 606 aaaaaagaatgccacctccaggaatcgaacctgggtttcatcggccacaacgatgtgtaa 665
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7086 aaaaaataatgccacctccaggaatcgaacctgggtttcatcggccacaacgatgtgtaa 7027
Query: 666 taacccctatactaagatggc 686
|||||||||||||||||||||
Sbjct: 7026 taacccctatactaagatggc 7006
>3x_Contig1799
Length = 39855
Score = 145 bits (73), Expect = 1e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 614 atgccacctccaggaatcgaacctgggtttcatcggccacaacgatgtgtaataacccct 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30427 atgccacctccaggaatcgaacctgggtttcatcggccacaacgatgtgtaataacccct 30368
Query: 674 atactaagatggc 686
|||||||||||||
Sbjct: 30367 atactaagatggc 30355
>3x_Contig1772
Length = 25851
Score = 143 bits (72), Expect = 4e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 615 tgccacctccaggaatcgaacctgggtttcatcggccacaacgatgtgtaataaccccta 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11892 tgccacctccaggaatcgaacctgggtttcatcggccacaacgatgtgtaataaccccta 11951
Query: 675 tactaagatggc 686
||||||||||||
Sbjct: 11952 tactaagatggc 11963
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5251
Number of Sequences: 1807
Number of extensions: 5251
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 4
length of query: 977
length of database: 10,358,551
effective HSP length: 16
effective length of query: 961
effective length of database: 10,329,639
effective search space: 9926783079
effective search space used: 9926783079
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)